WIKI_TMP=$(mktemp -d)
git clone --depth 50 <url> "$WIKI_TMP/repo"
cd "$WIKI_TMP/repo"
REPO_SHA=$(git rev-parse HEAD)
REPO_NAME=$(basename <url> .git)

cd <path>
REPO_SHA=$(git rev-parse HEAD 2>/dev/null || echo "uncommitted")
REPO_NAME=$(basename "$PWD")

OUTPUT_DIR="$HOME/.hermes/wikis/$REPO_NAME"
mkdir -p "$OUTPUT_DIR/modules" "$OUTPUT_DIR/diagrams"

# Shallow tree first
ls -la

# Deeper tree, noise filtered
find . -type d \
  -not -path '*/\.*' \
  -not -path '*/node_modules*' \
  -not -path '*/venv*' \
  -not -path '*/__pycache__*' \
  -not -path '*/dist*' \
  -not -path '*/build*' \
  -not -path '*/target*' \
  -maxdepth 3 | sort

# Language breakdown (skip if pygount unavailable)
pygount --format=summary \
  --folders-to-skip=".git,node_modules,venv,.venv,__pycache__,.cache,dist,build,target" \
  . 2>/dev/null || true

# <Project Name>

<One paragraph: what it is and what it's for. Self-contained — don't assume the
reader has the source README.>

## Key Concepts

- **<Concept 1>** — <one line>
- **<Concept 2>** — <one line>

## Entry Points

- [`path/to/main.py`](https://github.com/NousResearch/hermes-agent/blob/main/optional-skills/software-development/code-wiki/<link>) — <what runs when you start it>
- [`path/to/cli.py`](https://github.com/NousResearch/hermes-agent/blob/main/optional-skills/software-development/code-wiki/<link>) — <CLI surface>

## High-Level Architecture

<2-3 sentences. Detail goes in architecture.md.>

See [architecture.md](https://github.com/NousResearch/hermes-agent/blob/main/optional-skills/software-development/code-wiki/architecture.md).

## Module Map

| Module | Purpose |
|---|---|
| [`<module>`](https://github.com/NousResearch/hermes-agent/blob/main/optional-skills/software-development/code-wiki/modules/<module>.md) | <one-line purpose> |

## Getting Started

See [getting-started.md](https://github.com/NousResearch/hermes-agent/blob/main/optional-skills/software-development/code-wiki/getting-started.md).
````

For link targets in local mode use relative paths. For cloned repos use `https://github.com/<owner>/<repo>/blob/<sha>/<path>` so links survive future commits.

### 5. Write `architecture.md`

````markdown
# Architecture

<2-3 paragraphs: shape of the system. What talks to what. Where data enters,
where it exits, where state lives.>

## Components

- **<Component>** — <1-2 sentences>. See [`modules/<module>.md`](https://github.com/NousResearch/hermes-agent/blob/main/optional-skills/software-development/code-wiki/modules/<module>.md).

## System Diagram

```mermaid
flowchart TD
    User([User]) --> Entry[Entry Point]
    Entry --> Core[Core Engine]
    Core --> StorageA[(Database)]
    Core --> ExternalAPI{{External API}}

**Mermaid shape semantics:**
- `[]` = component
- `[()]` = database / storage
- `{{}}` = external service
- `(())` = entry point or terminal
- `-->` = sync call, `-.->` = async/event

Cap at ~20 nodes per diagram. Split into sub-diagrams if larger.

### 6. Write per-module docs in `modules/`

For each selected module, inspect its layout with `ls`, identify 3–5 most important files (by size, by being named `core.py` / `main.py` / `__init__.py`, by being imported a lot), then `read_file` those files (use `offset` / `limit` to read only what you need; prefer `search_files` for specific symbols).

````markdown
# Module: `<module>`

<1-2 sentence purpose.>

## Responsibilities

- <bullet>
- <bullet>

## Key Files

- [`<module>/<file>`](https://github.com/NousResearch/hermes-agent/blob/main/optional-skills/software-development/code-wiki/<link>) — <what it does>

## Public API

<Functions/classes/constants other code uses. Group related items. Show
signatures, not full implementations.>

## Internal Structure

<How the module is organized internally. State management.>

## Dependencies

- **Used by:** <other modules>
- **Uses:** <other modules + external libs>

## Notable Patterns / Gotchas

- <Anything non-obvious>
````

### 7. Write `diagrams/class-diagram.md`

Pick the 5–10 most important classes/types. `read_file` them, then write:

````markdown
# Class Diagram

## Core Types

```mermaid
classDiagram
    class Agent {
        +string name
        +list~Tool~ tools
        +chat(message) string
    }
    class Tool {
        <<interface>>
        +name string
        +execute(args) any
    }
    Agent --> Tool : uses
    Tool <|-- TerminalTool
    Tool <|-- WebTool

For languages without classes (Go, C, Rust): use the diagram for struct relationships, or skip class-diagram.md and explain it in prose in architecture.md. Don't force-fit.

### 8. Write `diagrams/sequences.md`

Pick 2–4 of the most important workflows. Trace each call path through the code (read entry point, follow function calls), then:

````markdown
# Sequence Diagrams

## Workflow: <Name>

<1 sentence describing what this does and when it runs.>

```mermaid
sequenceDiagram
    participant User
    participant CLI
    participant Agent
    participant LLM
    User->>CLI: types message
    CLI->>Agent: chat(message)
    Agent->>LLM: API call
    LLM-->>Agent: response + tool_calls
    Agent->>Agent: execute tools
    Agent-->>CLI: final response

Don't invent participants. Every box must correspond to a real component the reader can find in the code.

### 9. Write `getting-started.md`

````markdown
# Getting Started

## Prerequisites

<From manifest files + README. Be specific — versions if pinned.>

## Installation

```bash
<exact commands>

<minimum command to see the system do something useful>

### 10. Write `api.md` (skip if not applicable)

Only write this if the project is a library or API server. If it is:

- Find the public API surface (`__init__.py` exports, OpenAPI specs, route handlers, exported types)
- Document each public entry with signature, parameters, return type, one-line description
- Group by category

### 11. Write the state file

```bash
cat > "$OUTPUT_DIR/.codewiki-state.json" <<EOF
{
  "repo_name": "$REPO_NAME",
  "source_path": "$PWD",
  "source_sha": "$REPO_SHA",
  "generated_at": "$(date -u +%Y-%m-%dT%H:%M:%SZ)",
  "generator": "hermes-agent code-wiki skill v0.1.0",
  "modules_documented": []
}
EOF

Generated wiki at ~/.hermes/wikis/<repo-name>/:
  README.md                   project overview, module map
  architecture.md             system architecture + flowchart
  getting-started.md          setup, first run, workflows
  modules/<N files>           per-module deep-dives
  diagrams/architecture.md    Mermaid flowchart
  diagrams/class-diagram.md   Mermaid class diagram
  diagrams/sequences.md       Mermaid sequence diagrams

for f in "$OUTPUT_DIR"/diagrams/*.md "$OUTPUT_DIR"/architecture.md; do
  opens=$(grep -c '^```mermaid' "$f")
  total=$(grep -c '^```' "$f")
  echo "$f: $opens mermaid blocks, $total total fences (expect total = opens*2)"
done

ls "$OUTPUT_DIR"/{README.md,architecture.md,getting-started.md,.codewiki-state.json} \
   "$OUTPUT_DIR"/modules/ "$OUTPUT_DIR"/diagrams/